Thomas Kane

CURRICULUM VITAE | LINKEDIN | GITHUB | ORCID | SCHOLAR

Software developer and scientist based in London. I have worked in disciplines including Medical Physics, Optics, and Genetics. I work with Python, and Rust. Please check out some of my projects and publications below. 🙂

Python Applications

haystack

Finding cells in 3D stacks using cellpose and K-means clustering

ao_cropper

Easily crop subsections from AOSLO images with auto-scaling

bound_cell

Manipulate cell distributions with arbitrary border shapes

Selected Publications

Kane T., et al. (2022) Photoaversion in inherited retinal diseases: clinical phenotypes, biological basis, and qualitative and quantitative assessment


Georgiou M., Kane T., et al. (2020) Prospective Cohort Study of Childhood-Onset Stargardt Disease: Fundus Autofluorescence Imaging, Progression, Comparison with Adult-Onset Disease, and Disease Symmetry


Georgiou M., Singh N., Kane T., et al. (2020) Photoreceptor structure in GNAT2-associated achromatopsia

Other Projects

Social media book sharing site using Flask, Jinja2 templates, and sqlalchemy


Python tools for analysing animal escapes tracked with DeepLabCut


Various batteries-included psychopy stimuli objects for use in mice vision studies